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athenahealth vs Flatiron Health: Which Healthcare IT Is Better in 2026?

Compare pricing, features, integrations, verified reviews, AI capabilities, security, and customer satisfaction, side by side, with no marketing spin.

Rating
,
Reviews
0
From
Custom

in Healthcare IT

Leads 2/9
Rating
,
Reviews
0
From
Custom

in Healthcare IT

The Short Answer

athenahealth vs Flatiron Health, in 15 seconds

Choose athenahealth if…

  • You prefer athenahealth's approach and ecosystem

Choose Flatiron Health if…

  • You want to trial before paying
  • You have strict security & compliance needs

Head-to-Head Scorecard

How athenahealth and Flatiron Health score

Flatiron Health leads on 2 of 9 measured dimensions.

  • Customer Rating

    Average score from verified user reviews

    Even
    athenahealth
    No reviews
    Flatiron
    No reviews
  • Review Volume

    Number of verified reviews, a proxy for adoption

    Even
    athenahealth
    0
    Flatiron
    0
  • Entry Pricing

    Lowest published starting price (free plan = lowest)

    Even
    athenahealth
    Custom
    Flatiron
    Custom
  • Free Access

    Availability of a free plan and/or free trial

    Flatiron Health
    athenahealth
    Paid only
    Flatiron
    Free trial
  • Integrations

    Number of listed third-party integrations

    Even
    athenahealth
    6
    Flatiron
    6
  • Features

    Number of listed product capabilities

    Even
    athenahealth
    0
    Flatiron
    0
  • AI Features

    Capabilities mentioning AI, automation or ML

    Even
    athenahealth
    ,
    Flatiron
    ,
  • Security & Compliance

    Number of listed compliance certifications

    Flatiron Health
    athenahealth
    3
    Flatiron
    4
  • Platforms & Deployment

    Supported platforms and deployment options

    athenahealth
    athenahealth
    6
    Flatiron
    4

Feature Comparison

athenahealth vs Flatiron Health feature breakdown

Search or filter the full feature matrix, core features, AI, integrations, APIs, security and compliance.

athenahealth
Flatiron Health
Overview
User rating
,
,
Pricing model
PAID
Quote-based
Starting price
Custom
Custom
Free version
Free trial
Features
Key capabilities
,
,
AI features
,
,
Integrations & API
Integrations
HL7 FHIRSurescriptsMicrosoft 365SalesforceStripeNuance
SalesforceMicrosoft 365OracleSASAWSHL7 FHIR
Public API
Platforms
Deployment
CloudSaaS
CloudSaaS
Platforms
WebiOSAndroidAPI
WebAPI
Mobile support
Security & Compliance
Compliance
HIPAASOC 2HITRUST
SOC 2ISO 27001HIPAA21 CFR Part 11
Vendor
Company
,
,
Verified
Founded
1997
2012
Headquarters
Boston, Massachusetts, United States
New York, New York, USA

Pricing Comparison

athenahealth vs Flatiron Health pricing

Entry pricing, plan tiers and the cost factors that shape total cost of ownership.

athenahealth

Custom to start
PracticeCustom
  • Practice management
  • Cloud EHR
  • E-prescribing
  • Reporting
EnterpriseCustom
  • Network claims intelligence
  • Revenue cycle services
  • Everything in Practice
  • Dedicated support

Flatiron Health

Custom to start
ProfessionalCustom
  • Integrations
  • oncology EHR
  • real-world evidence datasets
  • Standard support
EnterpriseCustom
  • Everything in Professional
  • Advanced security and controls
  • Dedicated support and onboarding
  • practice analytics

Total cost of ownership factors

Free planathenahealth Flatiron
Free trial to evaluateathenahealth Flatiron
Transparent published pricingathenahealth Flatiron
Public API (build vs. buy add-ons)athenahealth Flatiron

Beyond list price, factor in implementation, training, add-ons and per-seat scaling when estimating total cost of ownership.

Pros & Cons

athenahealth vs Flatiron Health: strengths and trade-offs

athenahealth

Pros

  • Compliance: HIPAA, SOC 2, HITRUST
  • Public API available

Cons

  • No free plan
  • No free trial
  • Pricing is quote-based (less transparent)

Flatiron Health

Pros

  • Free trial offered
  • Compliance: SOC 2, ISO 27001, HIPAA
  • Public API available

Cons

  • No free plan
  • Pricing is quote-based (less transparent)

Buyer Fit

Who should use athenahealth vs Flatiron Health?

Startups

Either

Either keeps early-stage costs lowest with its entry tier.

Small businesses

Either

Either offers the most accessible pricing for lean teams.

Agencies

Either

Either connects to more tools for multi-client workflows.

Enterprises

Flatiron Health

Flatiron Health leads on compliance and breadth for complex needs.

Ecommerce

Either

Either integrates with more of the commerce stack.

SaaS companies

Either

Either is the more developer- and automation-friendly choice.

Integration overlap

Shared integrations (3)

HL7 FHIRMicrosoft 365Salesforce

Only in athenahealth (3)

SurescriptsStripeNuance

Only in Flatiron Health (3)

OracleSASAWS

Keep Exploring

Other alternatives worth considering

Similar healthcare it products buyers compare alongside athenahealth and Flatiron Health.

Ask SIA which solution fits your business

SIA, Saaskart's AI buying assistant, weighs athenahealth and Flatiron Health against your team size, budget, integrations and compliance needs, then recommends the right fit and the questions to ask each vendor.

Get a personalised recommendation

athenahealth vs Flatiron Health, Frequently Asked Questions

What is the difference between athenahealth and Flatiron Health?

athenahealth and Flatiron Health are both Healthcare IT solutions. athenahealth is rated 0.0/5 by 0 users, while Flatiron Health is rated 0.0/5 by 0 users. The main differences lie in pricing, features, and target audience.

Which is better, athenahealth or Flatiron Health?

Based on user ratings, athenahealth scores higher at 0.0/5. The best choice depends on your team size, budget, and specific requirements.

Which is cheaper, athenahealth or Flatiron Health?

Both products have custom pricing. We recommend contacting both vendors for a quote tailored to your team size.

Does athenahealth or Flatiron Health have a free plan?

Neither athenahealth nor Flatiron Health currently offers a free plan, but Flatiron Health provides a free trial.

Can I switch from athenahealth to Flatiron Health?

Switching between athenahealth and Flatiron Health is possible. Both support data export. Check integration compatibility and plan for data migration to minimise disruption to your team.

Who should use athenahealth vs Flatiron Health?

athenahealth is best suited for teams that prioritise enterprise features. Flatiron Health works well for teams needing advanced capabilities.

Our Verdict

The bottom line on athenahealth vs Flatiron Health

Best Overall

Either

It's a tie balances user satisfaction and proven adoption.

Best for Startups

Either

It's a tie has the friendliest entry point for new teams.

Best for Enterprise

Flatiron Health

Flatiron Health leads on compliance and feature breadth.

Best Value

Either

It's a tie delivers the lowest cost to get started.

Best AI Features

Either

Comparable AI capabilities on both sides.

Highest Rated

Either

Both earn equal user ratings.

Ready to decide between athenahealth and Flatiron Health?

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